CDS
| Accession Number | TCMCG007C06207 |
| gbkey | CDS |
| Protein Id | XP_033148066.1 |
| Location | join(6543568..6544260,6544344..6544812,6544905..6544990,6545090..6545203,6545295..6545483,6545577..6545642,6545815..6545868,6545996..6546121,6546243..6546359,6546523..6546630,6546710..6546836,6547104..6547235,6547423..6547596,6547678..6547958,6548526..6548703,6548795..6549024,6549106..6549295,6549368..6549593,6549682..6549837,6549968..6550055) |
| Gene | LOC103859500 |
| GeneID | 103859500 |
| Organism | Brassica rapa |
Protein
| Length | 1267aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_033292175.1 |
| Definition | abnormal spindle-like microcephaly-associated protein homolog isoform X5 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | Calponin homology (CH) domain |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K16743
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGAATGAAGAAAACGAACCAACGTGCGCTACACCAGCGACGCGGCCGCGTAATCCTCCGTCATCACACTTCACCGACATATCCAATTTCAAAACTCCGCGGCGTCCTTCCGTTATCAAATCAAATCTCGGCAACACTCCTCAATTCTTCACCGCATCTAAACAAACTCCCAAATCTATGTCCTCCACCTTCCGCCGTCCCTCACTCCTTCCTACTCACGCGTCTCGCTCCAAGGTCGCAGCTTCCTCGAGGCGGCTTAGGGCATTCGAGCTTCAGCAATCGCAGTCTTCTCGCAAGGCTGAGTTGAATAAAGAGAAGAGCCTTAGATCTCTCGCTAAGTCACTCACCGTGTGGCTCAATTTCTTGTTCGAAAACCCTGAAAGTTGCGGTTGCGATCCGTTAGAGAATGGCTCTGCTGTTGGTAGCGTCGGAAATGCGAAGAGAGATAGTTGCGAGGCTTTGCGAAGCGGTAAATCAGTGGGAGTGGATACGATGTGGCGTAGCCCCAAAAAGTCGAGGACTTTAGGTTGGTGTGGTGAGAAAGGATCATCCTTGAGTGGCTCCAAGTATTCAACGCTGAGGGAGTCTTTGAAAGAAGTTTGTAGCTTAGATGATTTGAAGCAGAGGATGCAGTTTCACTTGAGTTTGGGAAGTTGCAAGGAGATTTTCGATGTGATGACCCGTGTTACCAAGAATATCGATGAAGGGAGGATAAAGATGAAACCACAATGCCTTCTTGTAACTGATTTTGGACTGAAGGAGAAGGCCGTCAAGGCACTGATGTGTTACAACCAAGTTTGGCTTCGTCTAGGGTTGTATATCATCTTTGGCGGTGATTCCTTTTTGTGTGACAGCGAAGTTAACTCAGATCAAGAAACGGCATTCTTGAAGATGGTAATCAACAAGCAGTTTTTCTCCCATGACGGCCTTGCTAGAGCCTTTGCCTATAACAAGATGGTTGAGGGTTTATACAGACCAGGGTACTATGAAGCCCTTGGAACCGTGATTTTGAAGAGGATTCTGTTGCTTGTCCTTATATTAGATAGAGCTAAATCTCAAAGCTGTATTTCACTCAAGTATGGGATTGATGGGATAGATGGTGGCTCTCCCCTCTTGTTTTCAGAGAAATCTAGCTTAAAGTCTAGCCATCAACTTCTAAGTGAACTCCTGCCCTCTGATGTAATGCATGGAGAAGGGAATCTCCTAGCGCATCTAGTGATTATAGGGTACAAAATACCTTATCAGCAGTCTCCTATAGCTGAATATGAATTTAGAGTGAGAGACTTGTTTGGTGACCTCCAAGATGGCGTGCGGCTCTGCAGAGCCATTCAACTACTTCTTCATGATCCATCCATTCTCACGAAAATGGTAGTTCCATCCGACAATCGAAAGAAGAAGTTGGCCAACTGTAGAGTTGCACTTCAGTATCTGAAGGATGCTGGTGTTTCATTGAAAGATGACGAAGGAATGATGATAACTATAGAAGATGTTGCAGATGGTGACAGAGAGCTCTCTATTTCACTGCTATGGAACATTTTTGTACATTTGCAGCTACCTCTTCTGATCAATGGGAAACTCTTGACAGAGGAAATCTACAAAGTCCAGGGGCTGGAACAGAATAATCAAATTATCATGGCTACTCCTCTGGAAATGCTCTTGAACTGGATCCAGTCAATTACGAAGAAGAATGACTTCAAGGTAGAAAACTTTGCATCATTGGTTGATGGAAAGGGAATATGGTTCTTGCTTGACTACTATTTTCGGCGAGAAGTTTGCTGTCCTTGTCTTCACGAAGAGGATCCTGGTGGTCAACAAGGCCCTCGATCAGTAATGTCCAATACCGATTATCATGATGCAGTTCAGAACTTCATTCTGTCGCAAAAGTTGACAGCACTTTTGGGAAGTTTTCCTGAGGTTCTACAGATTGGGGACCTACTGGAACATAATGCAGTTGTTAGCAATCAAAGTGTGATTATACTGTTGGCTTTCTTATCATCAAAGCTGATCGTCAAGGAGAATATGGAGAAACTGAACTTTCATAAGTTGCTGTGCTCTAGCTGTCAAGATCAAGAGAAGAGATATTCGCGCATCAGTTGCAGCATCTCTGAAGCAGTTAGAAATGAGGAACCGGACAGAGAAAACGGAGAAGATGCTACTAAAACTTTCCAGGCAATCAAAGCCTGGTGGCAGGAAATGGCCTACCAAAATTCTGTTGGAGAAGTTAGTAGCCGTACCCCGCAGGGTTCCTTGTCTAGGAAAATCACTATGGATTTCGAACGAGAAGCAGCAGTAGTCATACAATCGAATTTCAGGGGACTTCATGCACGCCGCAAGTTTAGGAAGAAATTGAAAGAAGTCTGCTTCTTACAAGCTGCTATTCGGACATGGTTGTCAGTGAAACATATAAAAGTTCTTGAAATATTCACTGTTGAGGAAGTTACTTTACAGTTATCAGAAAGATCGGCCAACTTAAAATCTGTAGCGAGATATGTCAAGTACATTGTTGAACGGAGTCGCTTCCTCAAGTTGAGGAAATCTGTTTTGGTCATTCAGAAAGCTGTAAGGCGGCATCAGCGAAACCTTCATCATGAGCTGAAAGCAGCACTCAAAATTCAGCAAGCTTGGAGGAGTTATAAAGACAAAGTTATCTCTTCTATCACTATCCAATCTTATGTTCGTGGATGGATCACACGGAGAATGTATATCAATTACAAATTGTGTTCCGTACTCATTCAAAGATATTGCCGTGGTTGGCTGGCGAGAAGGAAGTTTTATCTTCAGAGAAAAGCAACAATATGCATTCAGAGTGCTATCCGAAAATTTAACTGCATTATGTCGTTTCATGGCTACAAGCATGCAGCCACAGAGCTTCAACGGCTCGTTAGAGGACAAATTGTTCGAAGCAGGCTTCAAGGAGCTTCTTATCTCAATTCAAAACTTGACGAAGGCGTTTCCAGACTTCCACAACACAGCGTTGAGATGACAACACAGCTACATTCCGTCATTAAACTGCAGCGTTGGTGGAGGTTTCTCCATTCACAGAATGTAAGAAGAAAATCAGCAGTCTTGATACAGCGGCATATTCGAGGTGTATTTGCCAGGCAAAGAACTTCAATGGAAAGACGTTACATTGTCATGATTCAATCACACTGGAGAGGCTACCTCACACGCAAAGCTGCAAAGGCTCAAGTTCTGGATCTGAGAGTAAGAATGCAAACTTCTGCAGCAAACATAGATGACAAGAAACGCTTGATAAACAAGCTTCTCTCTGCGCTTTCGGAACTACTCAGCATGAAAAAGGTCCACAACATTCTTCACATTTGTGAAACTCTGGATTCGGCGACAAAGTACTCTGACAAATGCTGTGAAGAGCTTGTGGCAGCTGGAGCTATAGACAAGTTGCTAACACTGATCCGGTCTGCAAGCAGAAGCATACCTGATCAAGAAGTTTCAAAACATGCACTTTCAACTTTGAGACACCTGGCTCGTTACCCACAAATGGCAGATGAGTTAATAGACACGAAAGGATCTATCCAGACAATTTTCTGGGAACTACTCAGGAACAAAGAAGAAGCATATTTCATAGCATCAGATGTTCTGAAGAAGATATGCAAAAGCCAAAAAGGCGTAGAAGCAGTTCGAAAGCTTCCTGCTTTGGTTAAGCGATTACACGCCTTAGTTGAGGAGCTAACTCGTAAGGCAAACATGGAGAAGAGGAATGTTAAGGGTCAGGGTGGAAAAGAAAAGAGCGAGAGAAGATTAAAGGAGGCTGTTGAGCTTCTGAAGCTCATAACCAGCAGATGA |
| Protein: MNEENEPTCATPATRPRNPPSSHFTDISNFKTPRRPSVIKSNLGNTPQFFTASKQTPKSMSSTFRRPSLLPTHASRSKVAASSRRLRAFELQQSQSSRKAELNKEKSLRSLAKSLTVWLNFLFENPESCGCDPLENGSAVGSVGNAKRDSCEALRSGKSVGVDTMWRSPKKSRTLGWCGEKGSSLSGSKYSTLRESLKEVCSLDDLKQRMQFHLSLGSCKEIFDVMTRVTKNIDEGRIKMKPQCLLVTDFGLKEKAVKALMCYNQVWLRLGLYIIFGGDSFLCDSEVNSDQETAFLKMVINKQFFSHDGLARAFAYNKMVEGLYRPGYYEALGTVILKRILLLVLILDRAKSQSCISLKYGIDGIDGGSPLLFSEKSSLKSSHQLLSELLPSDVMHGEGNLLAHLVIIGYKIPYQQSPIAEYEFRVRDLFGDLQDGVRLCRAIQLLLHDPSILTKMVVPSDNRKKKLANCRVALQYLKDAGVSLKDDEGMMITIEDVADGDRELSISLLWNIFVHLQLPLLINGKLLTEEIYKVQGLEQNNQIIMATPLEMLLNWIQSITKKNDFKVENFASLVDGKGIWFLLDYYFRREVCCPCLHEEDPGGQQGPRSVMSNTDYHDAVQNFILSQKLTALLGSFPEVLQIGDLLEHNAVVSNQSVIILLAFLSSKLIVKENMEKLNFHKLLCSSCQDQEKRYSRISCSISEAVRNEEPDRENGEDATKTFQAIKAWWQEMAYQNSVGEVSSRTPQGSLSRKITMDFEREAAVVIQSNFRGLHARRKFRKKLKEVCFLQAAIRTWLSVKHIKVLEIFTVEEVTLQLSERSANLKSVARYVKYIVERSRFLKLRKSVLVIQKAVRRHQRNLHHELKAALKIQQAWRSYKDKVISSITIQSYVRGWITRRMYINYKLCSVLIQRYCRGWLARRKFYLQRKATICIQSAIRKFNCIMSFHGYKHAATELQRLVRGQIVRSRLQGASYLNSKLDEGVSRLPQHSVEMTTQLHSVIKLQRWWRFLHSQNVRRKSAVLIQRHIRGVFARQRTSMERRYIVMIQSHWRGYLTRKAAKAQVLDLRVRMQTSAANIDDKKRLINKLLSALSELLSMKKVHNILHICETLDSATKYSDKCCEELVAAGAIDKLLTLIRSASRSIPDQEVSKHALSTLRHLARYPQMADELIDTKGSIQTIFWELLRNKEEAYFIASDVLKKICKSQKGVEAVRKLPALVKRLHALVEELTRKANMEKRNVKGQGGKEKSERRLKEAVELLKLITSR |